Statistics in Biomedical Measurements

ID: 1341
Course type: vocational and applied
Course coordinator: Jeftić D. Branislava
Lecturers: Jeftić D. Branislava, Stanković M. Ivana
Contact: Jeftić D. Branislava
Level of studies: B.Sc. (undergraduate) Academic Studies – Mechanical Engineering
ECTS: 6
Final exam type: written
Department: Department of Biomedical Engineering

Lectures

  • Semester 4, position 4

Goal

The objective of this course is to teach students the basic statistical methods applied in biomedical research and practice. Mastering the selection of meaningful datasets and its analysis allow students to reach conclusions relevant for the research, development and applications in biomedical engineering problems.

Outcome

Upon successful completion of this course, students shall be able to: •Use R software for statistical data processing •Create and process large sets of statistical data •Identify the limitations of datasets and confidence intervals •Model and explore the relationships between variables •Select and perform statistical analysis according to the problem they have to solve •Adequately interpret results and perform statistical analysis to predict the behavior of observed biomedical systems in the future

Theoretical teaching

Theoretical lectures: Introduction to probability theory. Types of variables and graphical representation of the data. Basics of descriptive statistics. Statistical software and introduction to R software and language of statistical computing. Statistical hypothesis, testing and types of tests. Univariate and multivariate analysis of variance. Cluster analysis. Hierarchical cluster analysis. K-means method. Reduction of dimensionality. Linear regression - univariate and multivariate. Model calibration, prediction of new observations, model validation. Types of validation. Nonlinear models. Basic machine learning algorithms.

Practical teaching

Practical work during the course includes assignments that follow theoretical lectures and are solved during practical work in R software package.

Attendance requirement

None.

Resources

Auditory room equipped with computer, video beam, internet connection and accompanied inventory. Computer room with software installed. 1. Written material from lectures (handouts) 2. R Software & R Studio

Assigned hours

Total assigned hours: 75

Active teaching (theoretical)

New material: 20
Elaboration and examples (recapitulation): 10

Active teaching (practical)

Auditory exercises: 0
Laboratory exercises: 0
Calculation tasks: 30
Seminar paper: 0
Project: 0
Consultations: 0
Discussion/workshop: 0
Research study work: 0

Knowledge test

Review and grading of calculation tasks: 0
Review and grading of lab reports: 0
Review and grading of seminar papers: 0
Review and grading of the project: 0
Test: 5
Test: 5
Final exam: 5

Knowledge test (100 points total)

Activity during lectures: 5
Test/test: 60
Laboratory practice: 0
Calculation tasks: 0
Seminar paper: 0
Project: 0
Final exam: 35
Requirement for taking the exam (required number of points): 35

Literature

J. Adler, R in a Nutshell, Second Edition, O’Reilly Media, Inc., USA 2012, ISBN: 9781449312084; M. Gardener, Beginning R The Statistical Programming Language, John Wiley& Sons, Inc., USA 2012, ISBN: 9781118164303; T. Hastie, R. Tibshirani, J. Friedman, The Elements of Statistical Learning, Second Edition, Springer New York, NY, 2009, ISBN: 978-0-387-84857-0; T. C. Urdan, Statistics in Plain English, Third Edition, Taylor and Francis Group, LLC, USA, 2011, ISBN: 9780415872911; Ј. Gareth, D. Witten, Т. Hastie, An Introduction to Statistical Learning: With Applications in R, Springer, 2017, ISBN: 978-1-4614-7137-0